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The Open Bioinformatics Foundation (OBF) is a non-profit, volunteer-run organization that supports #OpenSource #bioinformatics. Our member projects include #BioPerl, #BioJava, #BioRuby and #Biopython. We run an annual meeting, the Bioinformatics Open Source Conference (@BOSC).

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Bioinformatician/software dev at the Garvan Institute.

Admin of genomic.social

Views my own.

Author of:
- Buttery-eel
- BladeRunner
- pyslow5
- blue-crab
- squigglekit
- InterARTIC
- Deeplexicon
- HIVE-seq
- CoVarPlot
- sigknow/pysigfish

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The Bioconductor project develops and supports free open-source software for rigorous, reproducible analysis of biological data, focusing on R and statistical methods. We foster a diverse, collaborative, and welcoming community of developers and data scientists.

🧬 Bioinformatics | Open Source | Community-driven

🤝 Upcoming Conferences:
- BioCAsia2025 (Nov 27-28, Adelaide)
- EuroBioC2026 (Dates TBA, Turku)
- BioC 2026 (Aug 10-12, Seattle)

","updated":"2025-11-08 05:46:02.629Z","user":"","username":"Bioconductor"},{"collectionId":"pbc_1295301207","collectionName":"activitypub_actors","created":"2025-09-28 13:35:48.479Z","domain":"fosstodon.org","followerCount":6201,"followers":"https://fosstodon.org/users/hadleywickham/followers","following":"https://fosstodon.org/users/hadleywickham/following","followingCount":56,"icon":"https://cdn.fosstodon.org/accounts/avatars/109/427/468/786/892/224/original/07ef3294a215592a.jpg","id":"1kxn815n47rte2h","inbox":"https://fosstodon.org/users/hadleywickham/inbox","iri":"https://fosstodon.org/users/hadleywickham","isLocal":false,"last_fetched":"2025-11-08 05:46:02.871Z","outbox":"https://fosstodon.org/users/hadleywickham/outbox","preferred_username":"hadleywickham","public_key":"-----BEGIN PUBLIC KEY-----\nMIIBIjANBgkqhkiG9w0BAQEFAAOCAQ8AMIIBCgKCAQEAvK3tvby6psz7SHEMT+tq\nXwuv5R+R6GUfnex7u1ti4qF6uW2c8uWAcScYfsoXMPRRYWQORjKRHaJxA4+xDaCd\n8S6nWDaF/wiU3o3+BIX69N8JLQy6tVf0E0/0V1YGP4iT/V7Ir69hFQGNoI7f5fSG\nwBQ3fXvKenMPbR3g+o24Pw/23tRGRavV21HJwKGrRPLhJeJ+wsODtL7gypCeB/e8\nbJoVta43ArD+dJgLB6mJON8HqoOWKJJ/qgUYWzfnHED/jiDiemq2xVVhq2m7PLEf\n0iFM9WqUAyP62dvKlqsT6/2g5UBzswhrhPrQt1AqvKkGscI5hMcYYU2vPcfwtBYP\nxwIDAQAB\n-----END PUBLIC KEY-----\n","published":"2022-11-29 00:00:00.000Z","summary":"

R, data, visualisation, 🐕, 🍸, 🌈. He/him.

","updated":"2025-11-08 05:46:02.872Z","user":"","username":"Hadley Wickham"},{"collectionId":"pbc_1295301207","collectionName":"activitypub_actors","created":"2025-10-26 01:29:03.405Z","domain":"ecoevo.social","followerCount":216,"followers":"https://ecoevo.social/users/annaliisalaine/followers","following":"https://ecoevo.social/users/annaliisalaine/following","followingCount":180,"icon":"https://ecoevo.social/system/accounts/avatars/109/289/310/661/810/773/original/ccb012f909032bf4.png","id":"iabi8cks5dbm40q","inbox":"https://ecoevo.social/users/annaliisalaine/inbox","iri":"https://ecoevo.social/users/annaliisalaine","isLocal":false,"last_fetched":"2025-11-08 05:46:03.086Z","outbox":"https://ecoevo.social/users/annaliisalaine/outbox","preferred_username":"annaliisalaine","public_key":"-----BEGIN PUBLIC KEY-----\nMIIBIjANBgkqhkiG9w0BAQEFAAOCAQ8AMIIBCgKCAQEAslkHNGLkLkjcsgqQVWai\nkvorWt4uPHREja9kdY54hQbcGLKP0XKC7OelOBtxxFScT26B5MQNyX2zbuhGEOBB\n/4ijHqIzlcnQHB7s1+SW8XWd+l96d/6Wjaf8chcWenqQ9RvqeCx451OwT9KOkjOk\nJog97W97VA2uzKI0TNIWf+FSsHSbMfECuKtToG94AHV7ZUJjsqgCgHA/qCT/G4rw\nWwaBLtxS56CSKJfT7+ih04dbXE824RZh5iHpk1AItKx33OsjBAe6p941nsaAPrru\napzhNy6qCemlEbKfZaxQk03tEdfpzaYjHDmKoRzxu+M3EMVqQ1x7WnV7rOV63RZ5\nPQIDAQAB\n-----END PUBLIC KEY-----\n","published":"2022-11-05 00:00:00.000Z","summary":"

Professor of Ecology, interested in • Ecology and evolution of host-pathogen interactions • Biodiversity in a changing world • Plant-microbe interactions

","updated":"2025-11-08 05:46:03.087Z","user":"","username":"anna-liisa laine"},{"collectionId":"pbc_1295301207","collectionName":"activitypub_actors","created":"2025-11-02 02:10:12.761Z","domain":"ecoevo.social","followerCount":171,"followers":"https://ecoevo.social/users/PierreMarcDelau/followers","following":"https://ecoevo.social/users/PierreMarcDelau/following","followingCount":196,"icon":"https://ecoevo.social/system/accounts/avatars/109/366/765/635/485/901/original/b4cf21bd55b8fe88.png","id":"4dhr6osgxn6tyy5","inbox":"https://ecoevo.social/users/PierreMarcDelau/inbox","iri":"https://ecoevo.social/users/PierreMarcDelau","isLocal":false,"last_fetched":"2025-11-08 05:46:03.141Z","outbox":"https://ecoevo.social/users/PierreMarcDelau/outbox","preferred_username":"PierreMarcDelau","public_key":"-----BEGIN PUBLIC KEY-----\nMIIBIjANBgkqhkiG9w0BAQEFAAOCAQ8AMIIBCgKCAQEAtmnSUMQ1a5SvA2o+0Ssc\naYNolvdkn/29muQ1Hh7BuOaBBDVLcmt7+CaDxcIdVXMqlEUSeph7qWbKFrPA587Q\nADaYvgaw53rpROliOfFUiLyHnch3m9DMLiosu5cRoBVsvaH7EQKXLub9NgSj1JF2\ndr8o5vEWO99h8FuC4SjZ5qk+K/zd7pd0pNVkcfz//CyYfCrEs7oLooGPFdDjLqPd\nZ3NhmZ/8En8ZW9Ewyl4d4NgBoUnPTl9Q5S+F6nbkqmMDSox2lLLjeyJctpxuC+4k\n8i77MDdCW6s63dDgC6JLY96ZfmElQkaZqSt+Y8qNq6V9YT9KtajeNVuiD1EIwm9D\nDwIDAQAB\n-----END PUBLIC KEY-----\n","published":"2022-11-18 00:00:00.000Z","summary":"","updated":"2025-11-08 05:46:03.141Z","user":"","username":"PM Delaux"},{"collectionId":"pbc_1295301207","collectionName":"activitypub_actors","created":"2025-10-16 14:58:52.091Z","domain":"vis.social","followerCount":2306,"followers":"https://vis.social/users/CedScherer/followers","following":"https://vis.social/users/CedScherer/following","followingCount":478,"icon":"https://cdn.masto.host/vissocial/accounts/avatars/109/285/716/031/022/883/original/a90cab111edafcb7.png","id":"kotxfjt3u48sarb","inbox":"https://vis.social/users/CedScherer/inbox","iri":"https://vis.social/users/CedScherer","isLocal":false,"last_fetched":"2025-11-08 05:46:03.220Z","outbox":"https://vis.social/users/CedScherer/outbox","preferred_username":"CedScherer","public_key":"-----BEGIN PUBLIC KEY-----\nMIIBIjANBgkqhkiG9w0BAQEFAAOCAQ8AMIIBCgKCAQEA8is5r0OlNhaYj0g2yWqR\n3kI7hoNoG/CBbskgCukbPuXIiGjPlkoKVIe/Ezyox29dO6+tTE98fzW3YR3FOV+V\n1Uxpr+T0m53OkmRs1R+rAnRqUbIUoGUCJRJhpdMfoOF8f1NjjqKEfllyl05Tn8D4\n5+RX9KXuUk5tom9gFkzD4O9QNDjq6VnUA8Ubv7lll6926Oc5KMIP5USArZMPJ3fa\nZ5f+710yrokl3AgOKqVgJ5042rCx1OpdIH80cKXLSuAB1h6/hJbuRRz47QHKO6id\n07Npq43WmZ9UFbB0ctqsLCCXkh5m8UUNm4QFxylIT2pMD2dVg+hoRC7Ymy0HrqXU\ndQIDAQAB\n-----END PUBLIC KEY-----\n","published":"2022-11-04 00:00:00.000Z","summary":"

🧙‍♂️✨📊 Independent #DataViz Designer, Consultant & Instructor ♢ PhD in Computational Ecology ♢ #rstats #ggplot2 #figma ♢ #graphics #maps #ddj #design ♢ he/him

","updated":"2025-11-08 05:46:03.220Z","user":"","username":"Cédric Scherer"}],"page":1,"perPage":10,"totalItems":0,"totalPages":0}

Victoria Aguilar-Pontes

Following